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progenesis samespots v2 0 software  (Nonlinear Dynamics)

 
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    Nonlinear Dynamics progenesis samespots v2 0 software
    Progenesis Samespots V2 0 Software, supplied by Nonlinear Dynamics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/progenesis+samespot+v2+software/progenesis+qi+software/pm42099017-101-6-10
    Average 86 stars, based on 1 article reviews
    progenesis samespots v2 0 software - by Bioz Stars, 2026-09
    86/100 stars

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    Software:

    Article Title: Altered Protein Networks and Cellular Pathways in Severe West Nile Disease in Mice
    Article Snippet: .. Images were cropped with ImageQuantTM software (GE Healthcare UK) and further analyzed using the software package Progenesis SameSpot v2 software (Nonlinear Dynamics, Newcastle upon Tyne, UK). ..

    Article Title: Kinetic Analysis of Mouse Brain Proteome Alterations Following Chikungunya Virus Infection before and after Appearance of Clinical Symptoms
    Article Snippet: .. Images were cropped with ImageQuant software (GE Healthcare UK) and further analyzed using the software package Progenesis SameSpot v2 software (Nonlinear Dynamics, Newcastle upon Tyne, UK). ..



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    Figure 2. 2D-DIGE analysis (pH 3–10) of mock (M)-, early (E), late paralytic (LP) and late tetanus-like (LT) CHIKV-infected brain samples. (A) Representative data from a 2D-DIGE experiment using a 10% SDS-polyacrylamide gel with the pH 3–10 range is shown. Proteins from M-, E- and LP- and LT- CHIKV-infected brain samples were labeled with Cy5 or Cy3 cyanine dyes, as described in Table S1. As determined by <t>Progenesis</t> <t>SameSpot</t> software, protein spots that were differentially regulated between the four experimental groups (|FC| $1.3 and p #0.05), were submitted to mass spectrometry for identification. The numbers annotated on the gel corresponded to master gel numbers of deregulated protein spots. Spots were all identified as Mus musculus proteins and were listed in Table 1. Spots differentially modified between E and mock- (B), LP- and E- (C), LT and E- (D), LP and M- (E) and LT and M- (F) infected samples are represented by red (up-regulated) or blue (down-regulated) dots. doi:10.1371/journal.pone.0091397.g002
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    (A) Representative data from a 2D-DIGE experiment using a 10% SDS-polyacrylamide gel with the pH 3–10 range is shown. Proteins from M-, E- and LP- and LT- CHIKV-infected brain samples were labeled with Cy5 or Cy3 cyanine dyes, as described in . As determined by <t>Progenesis</t> <t>SameSpot</t> software, protein spots that were differentially regulated between the four experimental groups (|FC| ≥1.3 and p ≤0.05), were submitted to mass spectrometry for identification. The numbers annotated on the gel corresponded to master gel numbers of deregulated protein spots. Spots were all identified as Mus musculus proteins and were listed in . Spots differentially modified between E and mock- (B), LP- and E- (C), LT and E- (D), LP and M- (E) and LT and M- (F) infected samples are represented by red (up-regulated) or blue (down-regulated) dots.
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    Figure 2. 2D-DIGE analysis (pH 3–10) of mock (M)-, early (E), late paralytic (LP) and late tetanus-like (LT) CHIKV-infected brain samples. (A) Representative data from a 2D-DIGE experiment using a 10% SDS-polyacrylamide gel with the pH 3–10 range is shown. Proteins from M-, E- and LP- and LT- CHIKV-infected brain samples were labeled with Cy5 or Cy3 cyanine dyes, as described in Table S1. As determined by Progenesis SameSpot software, protein spots that were differentially regulated between the four experimental groups (|FC| $1.3 and p #0.05), were submitted to mass spectrometry for identification. The numbers annotated on the gel corresponded to master gel numbers of deregulated protein spots. Spots were all identified as Mus musculus proteins and were listed in Table 1. Spots differentially modified between E and mock- (B), LP- and E- (C), LT and E- (D), LP and M- (E) and LT and M- (F) infected samples are represented by red (up-regulated) or blue (down-regulated) dots. doi:10.1371/journal.pone.0091397.g002

    Journal: PloS one

    Article Title: Kinetic analysis of mouse brain proteome alterations following Chikungunya virus infection before and after appearance of clinical symptoms.

    doi: 10.1371/journal.pone.0091397

    Figure Lengend Snippet: Figure 2. 2D-DIGE analysis (pH 3–10) of mock (M)-, early (E), late paralytic (LP) and late tetanus-like (LT) CHIKV-infected brain samples. (A) Representative data from a 2D-DIGE experiment using a 10% SDS-polyacrylamide gel with the pH 3–10 range is shown. Proteins from M-, E- and LP- and LT- CHIKV-infected brain samples were labeled with Cy5 or Cy3 cyanine dyes, as described in Table S1. As determined by Progenesis SameSpot software, protein spots that were differentially regulated between the four experimental groups (|FC| $1.3 and p #0.05), were submitted to mass spectrometry for identification. The numbers annotated on the gel corresponded to master gel numbers of deregulated protein spots. Spots were all identified as Mus musculus proteins and were listed in Table 1. Spots differentially modified between E and mock- (B), LP- and E- (C), LT and E- (D), LP and M- (E) and LT and M- (F) infected samples are represented by red (up-regulated) or blue (down-regulated) dots. doi:10.1371/journal.pone.0091397.g002

    Article Snippet: Images were cropped with ImageQuant software (GE Healthcare UK) and further analyzed using the software package Progenesis SameSpot v2 software (Nonlinear Dynamics, Newcastle upon Tyne, UK).

    Techniques: Infection, Labeling, Software, Mass Spectrometry, Modification

    (A) Representative data from a 2D-DIGE experiment using a 10% SDS-polyacrylamide gel with the pH 3–10 range is shown. Proteins from M-, E- and LP- and LT- CHIKV-infected brain samples were labeled with Cy5 or Cy3 cyanine dyes, as described in . As determined by Progenesis SameSpot software, protein spots that were differentially regulated between the four experimental groups (|FC| ≥1.3 and p ≤0.05), were submitted to mass spectrometry for identification. The numbers annotated on the gel corresponded to master gel numbers of deregulated protein spots. Spots were all identified as Mus musculus proteins and were listed in . Spots differentially modified between E and mock- (B), LP- and E- (C), LT and E- (D), LP and M- (E) and LT and M- (F) infected samples are represented by red (up-regulated) or blue (down-regulated) dots.

    Journal: PLoS ONE

    Article Title: Kinetic Analysis of Mouse Brain Proteome Alterations Following Chikungunya Virus Infection before and after Appearance of Clinical Symptoms

    doi: 10.1371/journal.pone.0091397

    Figure Lengend Snippet: (A) Representative data from a 2D-DIGE experiment using a 10% SDS-polyacrylamide gel with the pH 3–10 range is shown. Proteins from M-, E- and LP- and LT- CHIKV-infected brain samples were labeled with Cy5 or Cy3 cyanine dyes, as described in . As determined by Progenesis SameSpot software, protein spots that were differentially regulated between the four experimental groups (|FC| ≥1.3 and p ≤0.05), were submitted to mass spectrometry for identification. The numbers annotated on the gel corresponded to master gel numbers of deregulated protein spots. Spots were all identified as Mus musculus proteins and were listed in . Spots differentially modified between E and mock- (B), LP- and E- (C), LT and E- (D), LP and M- (E) and LT and M- (F) infected samples are represented by red (up-regulated) or blue (down-regulated) dots.

    Article Snippet: Images were cropped with ImageQuant software (GE Healthcare UK) and further analyzed using the software package Progenesis SameSpot v2 software (Nonlinear Dynamics, Newcastle upon Tyne, UK).

    Techniques: Infection, Labeling, Software, Mass Spectrometry, Modification